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ERX6795544: Illumina NovaSeq 6000 paired end sequencing
1 ILLUMINA (Illumina NovaSeq 6000) run: 1M spots, 304.7M bases, 53.9Mb downloads

Design: Illumina sequencing of library DN810530K:B23, constructed from sample accession ERS6961616 for study accession ERP112087. This is part of an Illumina multiplexed sequencing run (39377_1). This submission includes reads tagged with the sequence GGTTAAGC.
Submitted by: Wellcome Sanger Institute
Study: NIHR_Global_Health_Research_Unit_on_Genomic_Surveillance_of_Antimicrobial_Resistance
show Abstracthide Abstract
This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre for Genomic Pathogen Surveillance). The aim of this project is primarily to fund research around intelligent surveillance for important emerging bacterial pathogens and monitoring the spread of antimicrobial resistance in low- and middle-income countries (LMICs) through whole-genome sequencing. The proposal would enable bacterial isolates to be collected from several regions around the Philippines; their genomes assembled and analysed following WGS; not only with the aim of tracking transmission and resistance patterns but eventually in designing models that will integrate into real-time, public health 'early-warning systems'.
Sample: GHRU-PH9810784
SAMEA9239217 • ERS6961616 • All experiments • All runs
Library:
Name: DN810530K:B23
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: pWGS-384
Runs: 1 run, 1M spots, 304.7M bases, 53.9Mb
Run# of Spots# of BasesSizePublished
ERR72261431,008,804304.7M53.9Mb2021-11-05

ID:
17651044

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